Publications

 

Su EC, Chen YS, Tien YC, Liu J, Ho BC, Yu SL, Singh S*. 2016. ChemiRs: a web application for microRNAs and chemicals. BMC Bioinformatics. 2016 Apr 18;17:167. (SCI |MATHEMATICAL & COMPUTATIONAL BIOLOGY| Ranking: 11/57= 19.30%| IF: 2.576) [PubMed]

 

Chang YL, Ho BC, Singh S , Yu SL, Yang PC. 2015. miR-146a and miR-370 coordinate enterovirus 71-induced cell apoptosis through targeting SOS1 and GADD45β. Cell Microbiol. 17(6):802-18. (SCI |MICROBIOLOGY| Ranking: 18/119= 15.13%| IF: 4.915) [PubMed]

 

Singh S and Li SS*. 2012. Epigenetic Effects of Environmental Chemicals Bisphenol A and Phthalates. Int. J. Mol. Sci. 13(8): 10143-10153. (SCI |CHEMISTRY, MULTIDISCIPLINARY| Ranking: 44/152= 28.95%| IF: 2.598) [PubMed]

 

Hu W, Yen YT, Singh S, Kao CL, Wu-Hsieh BA. 2012. SARS-CoV Regulates Immune Function-Related Gene Expression in Human Monocytic Cells. Viral Immunol. 25(4): 277-88. (SCI |VIROLOGY| Ranking: 24/32=75.00%| IF: 1.966) [PubMed]

 

Singh S* and Li SS. 2012. Bisphenol A and phthalates exhibit similar toxicogenomics and health effects. Gene 494(1):85-91. (SCI |GENETICS & HEREDITY| Ranking: 92/157=58.60%| IF: 2.341) [PubMed]

 

Chen WY, Liao CM, Ju YR, Singh S, Jou LJ, Chen BC, Tsai JW. 2012. Toxicokinetics/toxicodynamics with damage feedback improves risk assessment for tilapia and freshwater clam exposed to arsenic. Ecotoxicology. 21(2):485-95. (SCI |ENVIRONMENTAL SCIENCES| Ranking: 60/205=29.27%| IF: 2.355) [PubMed]

 

Ju YR, Chen WY, Singh S, Liao CM. 2011. Trade-offs between elimination and detoxification in rainbow trout and common bivalve molluscs exposed to metal stressors. Chemosphere 85(6):1048-56. (SCI |ENVIRONMENTAL SCIENCES| Ranking: 32/205=15.61%| IF: 3.206) [PubMed]

 

Tsai ZY, Chou CH, Lu CY, Singh S, Yu SL, Li SS. 2011. Proteomic comparison of human embryonic stem cells with their differentiated fibroblasts: Identification of 206 genes targeted by hES cell-specific microRNAs. Kaohsiung J Med Sci 27(8):299-306. (SCI |MEDICINE, RESEARCH & EXPERIMENTAL| Ranking: 97/111=87.39%| IF: 0.477) [PubMed]

 

Chen BC, Chen WY, Ju YR, Tsai JW, Jou LJ, Singh S, Liao CM. 2011. Combining bioaccumulation and coping mechanism to enhance long-term site-specific risk assessment for zinc susceptibility of bivalves. Chemosphere 84(5):707-15. (SCI |ENVIRONMENTAL SCIENCES| Ranking: 32/205=15.61%| IF: 3.206) [PubMed]

 

Singh S* and Li SS. 2011. Phthalates: Toxicogenomics and inferred human diseases. Genomics 97(3):148-57. (SCI |BIOTECHNOLOGY & APPLIED MICROBIOLOGY| Ranking: 48/157=30.57%| IF: 3.019) [PubMed]

 

Ho BC, Yu SL, Chen JJW, Chang SY, Yan BS, Hong QS, Singh S, Kao CL, Chen HY, Su KY, Li KC, Cheng CL, Cheng HW, Lee JY, Lee CN, and Yang PC. 2011. Enterovirus-induced miR-141 contributes to shutoff of host protein translation by targeting the translation initiation factor eIF4E. Cell host & microbe 9(1):58-69. (SCI |VIROLOGY| Ranking: 1/32=3.13%| IF: 13.500) [PubMed]

 

Chen BZ, Yu SL, Singh S, Kao LP, Tsai ZY, Yang PC, Chen BH, Shoei-Lung Li S. 2011. Identification of microRNAs expressed highly in pancreatic islet-like cell clusters differentiated from human embryonic stem cells. Cell Biol Int 35(1):29-37. (SCI |CELL BIOLOGY| Ranking: 153/180=85.00%| IF: 1.482) [PubMed]

 

Tsai ZY, Singh S, Yu SL, Chou CH, Li SS. 2010. A feeder-free culture using autogeneic conditioned medium for undifferentiated growth of human embryonic stem cells: comparative expression profiles of mRNAs, microRNAs and proteins among different feeders and conditioned media. BMC Cell Biol 12;11:76. (SCI |CELL BIOLOGY| Ranking: 114/180=63.33%| IF: 2.589) [PubMed]

 

Li SS, Yu SL and Singh S. 2010. Epigenetic states and expression of imprinted genes in human embryonic stem cells. World J Stem Cells 2(4):97-102. [WJSC]

 

Wang KH, Kao AP, Singh S, Yu SL, Kao LP, Tsai ZY, Lin SD, Li SS. 2010. Comparative expression profiles of mRNAs and microRNAs among human mesenchymal stem cells derived from breast, face and abdominal adipose tissues. Kaohsiung Journal of Medical Sciences. 26(3):113-122. (SCI |MEDICINE, RESEARCH & EXPERIMENTAL| Ranking: 97/111=87.39%| IF: 0.477) [PubMed]

 

Chen PM, Chen YY, Yu SL, Singh S, Lai CH, Chia JS. 2010. GlnR-mediated acid-repression of glutamine/glutamate metabolism clusters in Streptococcus mutans. Appl Environ Microbiol. 76(8):2478-86. (SCI |BIOTECHNOLOGY & APPLIED MICROBIOLOGY| Ranking: 29/157=18.47%| IF: 3.829) [PubMed]

 

Tsai ZY#, Singh S#, Yu SL, Kao LP, Chen BZ, Ho BC, Yang PC, Li SS. 2010. Identification of microRNAs regulated by activin A in human embryonic stem cells. J Cell Biochem. 109(1):93-102. (#Contributed Equally |SCI | BIOCHEMISTRY & MOLECULAR BIOLOGY| Ranking: 142/289=49.13%| IF: 2.868) [PubMed]

 

Li SSL, Yu SL, Kao LP, Tsai ZY, Singh S, Chen BZ, Ho BC, Liu YH, Yang PC. 2009. Target identification of microRNAs expressed highly in human embryonic stem cells. J Cell Biochem. 106(6):1020-1030. (SCI |BIOCHEMISTRY & MOLECULAR BIOLOGY| Ranking: 142/289=49.13%| IF: 2.868) [PubMed]

 

Kao LP, Yu SL, Singh S, Wang KH, Kao AP, and Li SSL. 2009. Comparative Profiling of mRNA and microRNA Expression in Human Mesenchymal Stem Cells Derived from Adult Adipose and Lipoma Tissues. The Open Stem Cell Journal. 1(9):1-9. [BSP]

 

Lee LC, Chen CM, Chen FL, LinPY, Hsiao YC, Wang PR, Su MT, Hsieh-Li HM, Hwang JC, Wu CH, Lee GC, Singh S, Lin Y, Hsieh SY, Lee-Chen GJ, Lin JY. 2009. Altered expression of HSPA5, HSPA8 and PARK7 inspinocerebellar ataxia type 17 identified by 2-dimensional fluorescence difference in gel electrophoresis. Clin Chim Acta. 400(1-2):56-62. (SCI |MEDICAL LABORATORY TECHNOLOGY| Ranking: 6/32=18.75%| IF: 2.535) [PubMed]

 

Yu SL, Singh S, Chen HW, Chen HY, Chen JJ, Chen WJ, Chen HS, Chen SC. 2008. Intra-abdominal adhesion formation induces anti-oxidative injury, enhances cell proliferation, and prevents complement-mediated lysis. Wound Repair Regen 16(3):388-98. (SCI |SURGERY| Ranking: 27/198=13.64%| IF: 2.911) [PubMed]

 

Yu SL, Chen HY, ChangGC, Chen CY, Chen HW, Singh S, Cheng CL, Yu CJ, Lee YC, Chen HS, Su TJ, Chiang CC, Li HN, Hong QS, Su HY, Chen CC, Chen WJ, Liu CC, Chan WK, Chen WJ, Li KC, Chen JJ, Yang PC. 2008. MicroRNA signature predicts survival and relapse in lung cancer. Cancer Cell 13(1):48-57. (SCI |ONCOLOGY| Ranking: 3/194=1.55%| IF: 26.566) [PubMed]

 

Chen HY, Yu SL, Chen CH, Chang GC, Chen CY, Yuan A, Cheng CL, Wang CH, Terng HJ, Kao SF, Chan WK, Li HN, Liu CC, Singh S , Chen WJ, Chen JJW, and Yang PC. 2007 A 5-Gene Signature and Clinical Outcome of Non-small Cell Lung Cancer. New England Journal of Medicine 356(1):11-20. (SCI |MEDICINE, GENERAL & INTERNAL| Ranking: 1/153=0.65%| IF: 53.298) [PubMed]

 

Singh S , Ou Yang HY, Yu SL, and Chen MY. 2007. A Kinetic-Dynamic Model for Regulatory RNA Processing. Journal of Biotechnology 127(3):488-95. (SCI |BIOTECHNOLOGY & APPLIED MICROBIOLOGY| Ranking: 46/157= 29.30%| IF: 3.045) [PubMed]

 

Li SSL, Liu YH, Tseng CN, Chung TL, Lee TY, and Singh S , 2006. Characterization and gene expression profiling of five new human embryonic stem cell lines derived in Taiwan. Stem Cells and Development 15(4):532-55. (SCI |TRANSPLANTATION| Ranking: 2/24= 8.33% | IF: 4.459) [PubMed]

 

Li SSL, Liu YH, Tseng CN, and Singh S , 2006. Analysis of Gene Expression in Single Human Oocytes and Preimplantation Embryos. Biochem. Biophys. Res. Commun . 340, 48-53. (SCI |BIOPHYSICS| Ranking: 39/74= 52.70% | IF: 2.484) [PubMed]

 

Kao CL, Chiou SH, Chen YJ, Singh S , Lin HT, Liu RS, Lo CW, Yang CC, Chi CW, Lee CH, and Wong TT. 2005. Increased Expression Of Osteopontin Gene In Atypical teratoid/rhabdoid tumor of the Central Nervous System. Modern Pathology 18(6):769-778. (SCI) [PubMed]

 

Liao CM, Liang HM, Chen BC, Singh S , Tsai JW, Chou YH. 2005. Dynamical coupling of PBPK/PD and AUC-based toxicity models for arsenic in tilapia Oreochromis mossambicus from blackfoot disease area in Taiwan . Environmental Pollution 135, 221-233. (SCI) [PubMed]

 

Liao CM, Chen BC, Singh S , Lin MC, Liu CW, Han BC. 2003. Acute toxicity and bioaccumulation of arsenic in tilapia Oreochromis mossambicus from blackfoot disease area in Taiwan . Environmental Toxicology 18(4):252-259. (SCI) [PubMed]

 

Lin, M. C., Liao, C. M., Liu, C. W., Singh S , 2001. Bioaccumulation of arsenic in aquacultural large-scale mullet Liza macrolepis from blackfoot disease area in Taiwan . Bull. Environ. Contam. Toxicol. 67(1), 91-97. (SCI)

 

Liao, C. M. and Singh S , 1998. Modeling dust-borne odor dynamics in swine housing based on age and size distributions of airborne dust. Applied Math. Modelling 22(9), 671-685.(SCI)

 

Liao, C.M. and Singh S , 1998. Characterizing odor adsorption on dust surface based on age and size distributions of airborne dust in a ventilated airspace. J. Environ. Sci. Health A33(6) : 1091-1117. (SCI)

 

Liao, C. M., Singh S , and Wang, T. S. 1998. Characterizing the performance of alternative evaporative cooling pad media in thermal environmental control applications. J. Environ. Sci. Health A33(7), 1391-1417.(SCI)

 

Liao, C. M., Liang, H. M. and Singh S , 1998. Exposure assessment model for odor causing VOCs volatilization from stored pig slurry. J. Environ. Sci. Health B33(4), 457-486.(SCI) 16. Liao, C. M., Liang, H. M. and Singh S , 1997. Swine manure cleanup criteria calculation for odor causing VOCs based on manure-to-ventilation air exposure pathway. J. Environ. Sci. Health B32(4), 449-468.(SCI)

 

 

Conference Paper

 

Singh S*  and Steven Shoei-Lung Li. 2011. Phthalates: toxicogenomics and inferred human diseases. EPS 2011 International Environmental Conference Hohhot, Inner Mongolia, China, August 3-5.

 

Singh S , Chen HI, Hsu FH, Tsai MH, Chuang EY, and Chen Y. 2006. Development of a Normalization Algorithm for Array Comparative Genomic Hybridization. Conference on IEEE International Workshop on Genomic Signal Processing and Statistics. Texas , May 28-30.

 

F.Q.H. Ngo, J.F. Chang, J.Y.H. Chan, Singh S , U. C. Yang, H. M. Ting, and M Hung. Mechanistic investigations of radiation-induced cell-cycle G2 arrest using microarray gene expression data, cell progression signal pathways, and bioinformatics 93rd Ann. Meeting of AACR, San Francisco, Ca, April 6-10, 2002.

 

Ngo, Frank Q. H., Singh S , Ting, H. M., Liu, S. P., Perng, C. H. and Yang, U. C. 2002. Factors That May Influence Microarray Data Reproducibility: The Error Sources. Conference on Microarray Data Analysis, Washington , DC , USA , September 10-12.

 

Liao, C. M., Singh S , and Lin, C. M. 1998. Modeling odor adsorption on dust surface based on age and size distributions of airborne dust in ventilated airspace. International Conference on Agricultural Engineering, Oslo , Norway . Paper No. 98-B-055. August 24-27.

 

 

 

 

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